Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922183.1_cds_XP_016471002.1_63394
CDS Infomation

[gene=LOC107793214] [db_xref=GeneID:107793214] [protein=WD repeat-containing protein 43-like isoform X5] [protein_id=XP_016471002.1] [location=complement(join(30546..30722,30804..30878,30964..31075,31336..31418,31496..31591,31725..31867,32708..32818,33210..33747,33835..33923,34002..34156,35313..35425,35775..35801))] [gbkey=CDS]
Sequence

ATGGCGTGCGGTTTTGTTGGAAAGAAGCGCAGAAAAGAACAACGTTTATTAATAGCCCTT
GGCACAGATGATGGAACTGTTTTAGCAGTTGATATTTCTGCTGAATTTATAAGGTGGAGA
AAAGCTGGAGCCCTTTCTAGTGGAGCTGCTGGTCTGTTTTTTGTGGACAAAGGCCGTAAA
ATTCATGCTGTTGCTGCGAATGGTTTAGTATTTGAGATGAACTCCGACACTGGAGAAGTC
ATCAAAGAATTCAAAGTGTCAAAGAAGCCCTTTTCCTCAGTGGCTTATTCAACTGACGAG
AAAATTATAGCTGCAGCCAGTGATAAGTTGCGATTTCTAAGTTTAGAAAGTGGGAAAGAG
TTGCTGAAGTTTTCTCCTGACTCGGCTGCTGCACAGCGTTTATGGCTATCTGATGATGCC
CAATTTGCTGTTACTGCGGGGCTTGGCGAGAAGCAACTTCAAGTGTGGAAACTTGATTTT
GGTGAAAGGGCTGCAGATTATGGGCAGGTTCTTTCCATGAAACATCCTCCTATAATTGTT
GAATGCAGGAAGAATTGCAAGGGAGAAGACGGTATGGTTGTCCTTGCAATATCAGAGAAG
GGTGTTTGTAATGTTTGGAACTTTGAGTCTGTCACTGATGAAGTTGCAAAGCCAATTAAG
ATCACCGTGAAAGCTAGCAAAGGGGAAACAGAAAAGAAAACTGGAAGAGCTAAAAAGAAC
CTTGCGCCCATAATTGCTGCCAGATTGCATGCTTTGGATAGAGATGCACATTTGAAAGCC
TTGATTGCATATGGCTCTGTGGAATCCCCAGAGTTTACATCAGTAGACATTTCAAGTCCA
GAGGAGGATATCGTCATAGCAGCAGTAGACCAGACCAAGAAAGTGCTAGCTGCAGTTCAA
GAAAATGGTCATGCCAGAAAAGGTGCAGACATGGAAAAGGAAGGTGCTAAATTAATTCAG
AAAAGCAAAGTGACGAATAAACGGCCAGCATCTGATCTGGATGTCACTCCACCAGTGATA
ATCACAGATGATGGTAATGGTGAACCTATAGATGGAGTTCAGATTGATGATCTAAACGAG
CCAACCATGGGTGAGAAACTCGCAAGGCTCCATTTGGCAGACAACAATGAAGATAAAAGC
AATGAGGATCTAGAATCTCCCCCTCAAACAAAGCCGCCAAGTGCTGATTCAGTTCATGTT
CTGCTCAAGCAAGCCCTTCATGCTGATGATCGAGCACTTTTGATAGATTGCTTATACAGA
CAAGATGAGAAGGTCATTGCAAATTCAGTATCTCTTTTAAATCCATCAGATGTTCTCAAG
CTTTTACAGTCACTCTTGTTAATTATTCAGTCAAGGGGCGCTGTATTGGCTTGTGCCCTT
CCCTGGTTGCGAAATTTGCTTCTTCAACACGCTAGTGGAATAATGTCTCAAGAATCCTCT
TTGCTTGTACTCAACTCTTTATATCAGCTTATTGATGCCAGACTTTCAACTCTCCACCAA
GCTCTTCAGCTATCAAGCTCCTTAGAATTGCTTTATGCAGGGACTATTGATGATGGTGAT
GAGGAAGATGGTGCCATACAGCCTATCATCTTTGAAGATGAAAGTGACGAGGAGGGTTCT
GAAGTTGCTATGGAAACAGAAAGCAACCCAGACGTCGAGGAACCAGAGGCTTTTAGTGAC
ATTAGTGATCACGAATTGAGTGATGGCATGAGCGAGTGA

Peptide Sequence

PEP ID

XP_016471002.1
PEP Infomation

PREDICTED: WD repeat-containing protein 43-like isoform X5 [Nicotiana tabacum]
Sequence

MACGFVGKKRRKEQRLLIALGTDDGTVLAVDISAEFIRWRKAGALSSGAAGLFFVDKGRK
IHAVAANGLVFEMNSDTGEVIKEFKVSKKPFSSVAYSTDEKIIAAASDKLRFLSLESGKE
LLKFSPDSAAAQRLWLSDDAQFAVTAGLGEKQLQVWKLDFGERAADYGQVLSMKHPPIIV
ECRKNCKGEDGMVVLAISEKGVCNVWNFESVTDEVAKPIKITVKASKGETEKKTGRAKKN
LAPIIAARLHALDRDAHLKALIAYGSVESPEFTSVDISSPEEDIVIAAVDQTKKVLAAVQ
ENGHARKGADMEKEGAKLIQKSKVTNKRPASDLDVTPPVIITDDGNGEPIDGVQIDDLNE
PTMGEKLARLHLADNNEDKSNEDLESPPQTKPPSADSVHVLLKQALHADDRALLIDCLYR
QDEKVIANSVSLLNPSDVLKLLQSLLLIIQSRGAVLACALPWLRNLLLQHASGIMSQESS
LLVLNSLYQLIDARLSTLHQALQLSSSLELLYAGTIDDGDEEDGAIQPIIFEDESDEEGS
EVAMETESNPDVEEPEAFSDISDHELSDGMSE

Transcript Sequence

Gene sequence data has not been registered.